[gpfsug-discuss] AFM weirdness

Simon Thompson (IT Research Support) S.J.Thompson at bham.ac.uk
Wed Aug 23 14:01:55 BST 2017


I've got a PMR open about this ... Will email you the number directly.

Looking at the man page for ld.gold, it looks to set '--posix-fallocate' by default. In fact, testing with '-Xlinker -no-posix-fallocate' does indeed make the code compile.

Simon

From: "vpuvvada at in.ibm.com<mailto:vpuvvada at in.ibm.com>" <vpuvvada at in.ibm.com<mailto:vpuvvada at in.ibm.com>>
Date: Wednesday, 23 August 2017 at 13:36
To: "gpfsug-discuss at spectrumscale.org<mailto:gpfsug-discuss at spectrumscale.org>" <gpfsug-discuss at spectrumscale.org<mailto:gpfsug-discuss at spectrumscale.org>>, Simon Thompson <S.J.Thompson at bham.ac.uk<mailto:S.J.Thompson at bham.ac.uk>>
Subject: Re: [gpfsug-discuss] AFM weirdness

I believe this error is result of preallocation failure, but traces are needed to confirm this.  AFM caching modes does not support preallocation of blocks (ex. using fallocate()). This feature is supported only in AFM DR.

~Venkat (vpuvvada at in.ibm.com<mailto:vpuvvada at in.ibm.com>)



From:        "Simon Thompson (IT Research Support)" <S.J.Thompson at bham.ac.uk<mailto:S.J.Thompson at bham.ac.uk>>
To:        gpfsug main discussion list <gpfsug-discuss at spectrumscale.org<mailto:gpfsug-discuss at spectrumscale.org>>
Date:        08/23/2017 03:48 PM
Subject:        Re: [gpfsug-discuss] AFM weirdness
Sent by:        gpfsug-discuss-bounces at spectrumscale.org<mailto:gpfsug-discuss-bounces at spectrumscale.org>
________________________________



OK so I checked and if I run directly on the "AFM" FS in a different "non
AFM" directory, it works fine, so its something AFM related ...

Simon

On 23/08/2017, 11:11, "gpfsug-discuss-bounces at spectrumscale.org<mailto:gpfsug-discuss-bounces at spectrumscale.org> on behalf
of Simon Thompson (IT Research Support)"
<gpfsug-discuss-bounces at spectrumscale.org<mailto:gpfsug-discuss-bounces at spectrumscale.org> on behalf of
S.J.Thompson at bham.ac.uk<mailto:S.J.Thompson at bham.ac.uk>> wrote:

>We're using an AFM cache from our HPC nodes to access data in another GPFS
>cluster, mostly this seems to be working fine, but we've just come across
>an interesting problem with a user using gfortran from the GCC 5.2.0
>toolset.
>
>When linking their code, they get a "no space left on device" error back
>from the linker. If we do this on a node that mounts the file-system
>directly (I.e. Not via AFM cache), then it works fine.
>
>We tried with GCC 4.5 based tools and it works OK, but the difference
>there is that 4.x uses ld and 5x uses ld.gold.
>
>If we strike the ld.gold when using AFM, we see:
>
>stat("program", {st_mode=S_IFREG|0775, st_size=248480, ...}) = 0
>unlink("program")                       = 0
>open("program", O_RDWR|O_CREAT|O_TRUNC|O_CLOEXEC, 0777) = 30
>fstat(30, {st_mode=S_IFREG|0775, st_size=0, ...}) = 0
>fallocate(30, 0, 0, 248480)             = -1 ENOSPC (No space left on
>device)
>
>
>
>Vs when running directly on the file-system:
>stat("program", {st_mode=S_IFREG|0775, st_size=248480, ...}) = 0
>unlink("program")                       = 0
>open("program", O_RDWR|O_CREAT|O_TRUNC|O_CLOEXEC, 0777) = 30
>fstat(30, {st_mode=S_IFREG|0775, st_size=0, ...}) = 0
>fallocate(30, 0, 0, 248480)             = 0
>
>
>
>Anyone seen anything like this before?
>
>... Actually I'm about to go off and see if its a function of AFM, or
>maybe something to do with the FS in use (I.e. Make a local directory on
>the filesystem on the "AFM" FS and see if that works ...)
>
>Thanks
>
>Simon
>
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